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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44805294_44805425_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44805294 - 44805425

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAGGAA

U12 Branch Point Sequence:

GTACTAGGAAGT

Flanking Amino Acid:

AEFPSSLTGKVAPEEFKASI

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

88.2

26.7

Major BPS

45.3

-0.2

1.4

41.1

39.7

Major PPT

92.2

0.95

0.5

89.3

19.6

Minor 5ss

33.8

-1.9

2.6

42.8

44.1

Minor BPS

36.2

-0.9

2.2

52.97

41.4

Associated Gene:

Gene:

CHIC2

Ensembl Gene ID:

ENSAPLG00000022741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045423

44788608 - 44813161

24554

ENSAPLT00000022548

44795092 - 44813161

18070