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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44805481_44811973_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44805481 - 44811973

Intron Length:

6493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAAGGGCG

5'SS Class:

major

3'SS Sequence:

TTTATTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTTACA

Flanking Amino Acid:

VVVRGSGHVTVFGLSNKFEA

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

55.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.4

0.95

0.7

87.7

29.7

Minor 5ss

31.5

-2.1

3.6

39.7

45.8

Minor BPS

62.2

0.38

1.6

75.3

35.7

Associated Gene:

Gene:

CHIC2

Ensembl Gene ID:

ENSAPLG00000022741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022548

44795092 - 44813161

18070

ENSAPLT00000045423

44788608 - 44813161

24554