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Intron Name: Anas_platyrhynchos_platyrhynchos_4_44888120_44888714_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

44888120 - 44888714

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTATGTACT

5'SS Class:

weak_major

3'SS Sequence:

CTTTTTGCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

TTTTTGCTACAG

Flanking Amino Acid:

HDSNYVSKGSTFLPVKWMAP

Intron Amino Acid Position:

871

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.4

42.9

Major BPS

0.45

0.9

67.6

25.3

Major PPT

85.3

0.79

0.8

32.2

Minor 5ss

45.4

-0.5

2.5

56.5

Minor BPS

-0.8

2.5

56.57

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003660

44866322 - 44893912

27591