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Intron Name: Anas_platyrhynchos_platyrhynchos_4_449844_450547_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

449844 - 450547

Intron Length:

704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGGCTT

5'SS Class:

major

3'SS Sequence:

TGGTTTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

TCTGGTTTATTT

Flanking Amino Acid:

QIRGQILQKLGMWYEAAELI

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

67.8

42.7

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

76.5

0.6

0.9

74.7

Minor 5ss

42.9

-0.8

3.4

61.4

44.5

Minor BPS

47.3

-0.1

2.1

66.47

45.5

Associated Gene:

Gene:

ALPK1

Ensembl Gene ID:

ENSAPLG00000013490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038111

420710 - 460307

39598

ENSAPLT00000014057

421131 - 460307

39177

ENSAPLT00000014051

420456 - 460307

39852