Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_45006847_45008066_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45006847 - 45008066

Intron Length:

1220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

GTAATTGTCACT

Flanking Amino Acid:

YWYFCQGTEQRYFDSPTISP

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

83.7

0.76

0.8

77.2

37.1

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

42.4

-0.5

2.3

61.36

42.7

Associated Gene:

Gene:

KIT

Ensembl Gene ID:

ENSAPLG00000004054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035304

44969990 - 45022541

52552

ENSAPLT00000018807

44989590 - 45022541

32952

ENSAPLT00000004290

44969990 - 45022541

52552