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Intron Name: Anas_platyrhynchos_platyrhynchos_4_450625_451837_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

450625 - 451837

Intron Length:

1213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TCATTTTCCATT

Flanking Amino Acid:

YFKLPLPDKKGIATSLGIIA

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.1

35.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

90.7

0.92

0.7

27.2

Minor 5ss

39.2

-1.2

3.4

56.9

47.4

Minor BPS

46.4

-0.2

1.9

63.73

41.7

Associated Gene:

Gene:

ALPK1

Ensembl Gene ID:

ENSAPLG00000013490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038111

420710 - 460307

39598

ENSAPLT00000014057

421131 - 460307

39177

ENSAPLT00000014051

420456 - 460307

39852