Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_45092022_45092140_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45092022 - 45092140

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

GAAATGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATG

Flanking Amino Acid:

KDPDYVRKGDARLPLKWMAP

Intron Amino Acid Position:

1055

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

84.3

27.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

64.8

0.33

1.1

58.7

46.6

Minor 5ss

47.2

-0.3

2.8

66.2

38.1

Minor BPS

72.9

0.58

1.2

71.67

35.7

Associated Gene:

Gene:

KDR

Ensembl Gene ID:

ENSAPLG00000005535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005923

45086554 - 45114125

27572