Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_45093704_45095166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45093704 - 45095166

Intron Length:

1463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGATAT

5'SS Class:

major

3'SS Sequence:

TGATTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

TGTTGCCTGATT

Flanking Amino Acid:

RSLSDVEEEDAGPEDLCKNP

Intron Amino Acid Position:

980

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

70.4

36.3

Major BPS

0.27

1.3

53.3

44.2

Major PPT

82.8

0.74

0.9

77.2

36.8

Minor 5ss

38.4

-1.3

3.4

52.1

46.1

Minor BPS

51.5

0.13

2.1

76.64

40.1

Associated Gene:

Gene:

KDR

Ensembl Gene ID:

ENSAPLG00000005535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005923

45086554 - 45114125

27572