Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_45101647_45101814_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45101647 - 45101814

Intron Length:

168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

AATAACAGAACT

Flanking Amino Acid:

KNNETLVEDSGIVLKDGNKT

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.2

31.2

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

83.9

0.76

0.6

78.2

30.7

Minor 5ss

25.4

-2.8

3.5

36.8

47.7

Minor BPS

47.2

-0.1

1.9

68.37

Associated Gene:

Gene:

KDR

Ensembl Gene ID:

ENSAPLG00000005535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005923

45086554 - 45114125

27572