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Intron Name: Anas_platyrhynchos_platyrhynchos_4_45191596_45193783_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45191596 - 45193783

Intron Length:

2188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTG

5'SS Class:

major

3'SS Sequence:

TTGCATGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

GGAAAAATAATC

Flanking Amino Acid:

LTQHPQQLLQTSRLLHGNQS

Intron Amino Acid Position:

794

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

66.2

44.9

Major BPS

71.2

0.53

70.3

31.9

Major PPT

76.4

0.59

73.1

41.8

Minor 5ss

34.4

-1.8

3.4

47.3

48.1

Minor BPS

40.3

-0.7

1.8

45.67

35.2

Associated Gene:

Gene:

CLOCK

Ensembl Gene ID:

ENSAPLG00000007176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007535

45188113 - 45221371

33259