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Intron Name: Anas_platyrhynchos_platyrhynchos_4_451934_452459_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

451934 - 452459

Intron Length:

526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTCTGTTTCACC

Flanking Amino Acid:

RFKTNAEIDLSLLREFSHRL

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

73.1

0.58

79.6

29.1

Major PPT

76.7

0.6

0.9

70.4

Minor 5ss

36.8

-1.5

3.5

53.4

44.8

Minor BPS

52.1

0.05

2.2

69.26

Associated Gene:

Gene:

ALPK1

Ensembl Gene ID:

ENSAPLG00000013490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038111

420710 - 460307

39598

ENSAPLT00000014057

421131 - 460307

39177

ENSAPLT00000014051

420456 - 460307

39852