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Intron Name: Anas_platyrhynchos_platyrhynchos_4_45194061_45194361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45194061 - 45194361

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCATTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

CTTCCATTAACA

Flanking Amino Acid:

VTTFAQERQIRFSQGQQLVT

Intron Amino Acid Position:

701

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

74.7

0.55

0.9

69.7

34.3

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

69.5

0.61

1.6

78.35

37.8

Associated Gene:

Gene:

CLOCK

Ensembl Gene ID:

ENSAPLG00000007176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007535

45188113 - 45221371

33259