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Intron Name: Anas_platyrhynchos_platyrhynchos_4_45199546_45199932_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45199546 - 45199932

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGCACC

5'SS Class:

major

3'SS Sequence:

TGAACATTGTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TAACTCTGAACA

Flanking Amino Acid:

SSHTAVSDHSSTPTKMTVDT

Intron Amino Acid Position:

450

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

71.8

38.2

Major BPS

81.9

0.79

0.8

81.9

Major PPT

61.4

0.26

1.1

58.8

Minor 5ss

43.1

-0.8

2.8

58.2

39.2

Minor BPS

61.4

0.35

1.4

68.14

37.2

Associated Gene:

Gene:

CLOCK

Ensembl Gene ID:

ENSAPLG00000007176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007535

45188113 - 45221371

33259