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Intron Name: Anas_platyrhynchos_platyrhynchos_4_45210765_45212191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45210765 - 45212191

Intron Length:

1427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACATTAT

5'SS Class:

major

3'SS Sequence:

TGTTTAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTTGTTTAACT

Flanking Amino Acid:

NEEFTQLMLEALDGFFLAIM

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

77.5

33.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

82.1

0.72

0.9

78.9

38.5

Minor 5ss

40.1

-1.1

3.2

57.9

46.7

Minor BPS

78.9

0.98

1.6

95.57

31.2

Associated Gene:

Gene:

CLOCK

Ensembl Gene ID:

ENSAPLG00000007176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007535

45188113 - 45221371

33259