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Intron Name: Anas_platyrhynchos_platyrhynchos_4_452565_452996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

452565 - 452996

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTCTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATT

Flanking Amino Acid:

YTPLFVLTAVNIRGVCLLSY

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.8

92.6

23.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.7

0.62

0.8

69.3

36.9

Minor 5ss

41.8

-0.9

2.9

57.3

41.2

Minor BPS

0.99

87.87

31.1

Associated Gene:

Gene:

ALPK1

Ensembl Gene ID:

ENSAPLG00000013490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014051

420456 - 460307

39852

ENSAPLT00000038111

420710 - 460307

39598

ENSAPLT00000014057

421131 - 460307

39177