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Intron Name: Anas_platyrhynchos_platyrhynchos_4_45267144_45267238_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
45267144 - 45267238

Intron Length:
95

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGTCAG

5'SS Class:
strong_major

3'SS Sequence:
TTCTTTTCATTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GTTTGAT

U12 Branch Point Sequence:
TTTCTTTTCATT

Flanking Amino Acid:
TYLSTDSQPQVSSALEELCF

Intron Amino Acid Position:
96

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.3
0.93
0.8
74
38.4

Major BPS
78.6
0.71
1.2
71.4
45.1

Major PPT
80.6
0.69
0.8
82.4
28

Minor 5ss
28.1
-2.5
2.7
31.4
42.8

Minor BPS
59.7
0.39
1.7
80.3
36.2

Associated Gene:

Gene:
NMU

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

45257458 - 45273937
16480