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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4535152_4538423_F

Intron Information:

Intron Rank:

144482

Intron Class:

major

Intron Phase:

Intron Coordinates:

4535152 - 4538423

Intron Length:

3272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

75.1

35.1

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

32.3

-2

3.1

41.7

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039708

4534547 - 4540208

5662