Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_45363744_45366737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45363744 - 45366737

Intron Length:

2994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

TAATCCATCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTGTCTTTGATG

Flanking Amino Acid:

TGTTKEGKKFATLPRKESAV

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.9

36.2

Major BPS

0.85

0.9

39.9

Major PPT

68.8

0.42

0.9

59.4

41.1

Minor 5ss

48.6

-0.1

2.8

64.8

41.1

Minor BPS

69.5

0.47

1.3

69.68

38.6

Associated Gene:

Gene:

EXOC1

Ensembl Gene ID:

ENSAPLG00000007799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008162

45353296 - 45376790

23495