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Intron Name: Anas_platyrhynchos_platyrhynchos_4_45369301_45369851_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
45369301 - 45369851

Intron Length:
551

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGA|GTATGTGCA

5'SS Class:
major

3'SS Sequence:
GCATTTTTACTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GAGTAAT

U12 Branch Point Sequence:
TGCATTTTTACT

Flanking Amino Acid:
PSGVPQTISSEKDMIRQMMT

Intron Amino Acid Position:
576

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.6
0.42
1.1
61.4
37.5

Major BPS
58.9
0.22
1.4
61.7
43.1

Major PPT
68.8
0.42
1
62.8
42.9

Minor 5ss
40.3
-1.1
3
46.1
43.3

Minor BPS
52.1
0.15
1.7
68.64
42.2

Associated Gene:

Gene:
EXOC1

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

45353296 - 45376790
23495

45353296 - 45376790
23495