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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4538532_4539949_F

Intron Information:

Intron Rank:

144483

Intron Class:

major

Intron Phase:

Intron Coordinates:

4538532 - 4539949

Intron Length:

1418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TTTTTTCCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.9

Major BPS

71.4

0.53

67.3

39.3

Major PPT

85.1

0.79

0.8

82.1

28.4

Minor 5ss

34.7

-1.7

3.2

41.8

38.8

Minor BPS

57.2

0.22

1.8

75.85

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039708

4534547 - 4540208

5662