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Intron Name: Anas_platyrhynchos_platyrhynchos_4_45402750_45403141_F


Intron Information:

Intron Rank:
24

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
45402750 - 45403141

Intron Length:
392

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAGAGGC

5'SS Class:
strong_major

3'SS Sequence:
TATCTTTTGGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTAAC

U12 Branch Point Sequence:
TGTTTTGTAACT

Flanking Amino Acid:
KRQLTTERFERERAIQEMRR

Intron Amino Acid Position:
1095

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.1
0.71
1
64.6
40.3

Major BPS
74.5
0.61
1.1
75.6
36.6

Major PPT
75.1
0.57
1
73.4
36.7

Minor 5ss
31.3
-2.1
3.4
42.6
44.5

Minor BPS
63.2
0.49
2
83.79
37.4

Associated Gene:

Gene:
CEP135

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

45375936 - 45404974
29039

45375936 - 45404974
29039