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Intron Name: Anas_platyrhynchos_platyrhynchos_4_454834_455637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

454834 - 455637

Intron Length:

804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

CTTCTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCAGAC

U12 Branch Point Sequence:

TTGTCCAGACTA

Flanking Amino Acid:

FKPKQLHKAYSALLLKYSKK

Intron Amino Acid Position:

965

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.1

75.6

35.1

Major BPS

51.6

0.04

1.1

48.6

36.6

Major PPT

87.6

0.85

0.6

84.2

23.7

Minor 5ss

47.7

-0.2

2.8

71.6

38.3

Minor BPS

-0.1

65.08

41.5

Associated Gene:

Gene:

ALPK1

Ensembl Gene ID:

ENSAPLG00000013490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038111

420710 - 460307

39598

ENSAPLT00000014057

421131 - 460307

39177

ENSAPLT00000014051

420456 - 460307

39852