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Intron Name: Anas_platyrhynchos_platyrhynchos_4_455792_457311_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

455792 - 457311

Intron Length:

1520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGAAC

5'SS Class:

major

3'SS Sequence:

TTTTCTTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTCTTGTTT

Flanking Amino Acid:

HFLHQEESLGRYVGKEYKEE

Intron Amino Acid Position:

1016

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

67.6

37.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

84.5

0.78

0.8

85.1

29.7

Minor 5ss

38.7

-1.3

3.1

51.2

45.6

Minor BPS

49.2

0.02

3.5

86.06

34.4

Associated Gene:

Gene:

ALPK1

Ensembl Gene ID:

ENSAPLG00000013490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038111

420710 - 460307

39598

ENSAPLT00000014057

421131 - 460307

39177

ENSAPLT00000014051

420456 - 460307

39852