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Intron Name: Anas_platyrhynchos_platyrhynchos_4_45580770_45585540_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45580770 - 45585540

Intron Length:

4771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTGA

5'SS Class:

major

3'SS Sequence:

TCTTTTGGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTTACTTAATA

Flanking Amino Acid:

IADIKKVSDSEILEDEDFNN

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

68.3

39.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.2

0.68

76.3

37.7

Minor 5ss

42.6

-0.8

56.2

47.9

Minor BPS

76.9

0.84

1.3

83.04

30.8

Associated Gene:

Gene:

PAICS

Ensembl Gene ID:

ENSAPLG00000009439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009901

45570984 - 45626029

55046

ENSAPLT00000025618

45570984 - 45612102

41119

ENSAPLT00000022530

45570574 - 45609236

38663