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Intron Name: Anas_platyrhynchos_platyrhynchos_4_45585625_45588758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45585625 - 45588758

Intron Length:

3134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CATGTTTCTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TTTTATTTAAAC

Flanking Amino Acid:

TQIKKETIDIDDDSISTTSE

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

81.6

0.78

0.8

24.9

Major PPT

75.1

0.56

0.9

69.2

36.8

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

70.3

0.62

1.5

80.76

33.2

Associated Gene:

Gene:

PAICS

Ensembl Gene ID:

ENSAPLG00000009439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028579

45570984 - 45612102

41119

ENSAPLT00000025618

45570984 - 45612102

41119

ENSAPLT00000022530

45570574 - 45609236

38663

ENSAPLT00000009901

45570984 - 45626029

55046