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Intron Name: Anas_platyrhynchos_platyrhynchos_4_45588831_45589473_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45588831 - 45589473

Intron Length:

643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

ATTATATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTTTCATTATAT

Flanking Amino Acid:

TPVAKRIVGTDNHIPLEEAR

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

81.8

0.72

0.9

78.4

39.4

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

0.3

79.78

41.4

Associated Gene:

Gene:

PAICS

Ensembl Gene ID:

ENSAPLG00000009439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009901

45570984 - 45626029

55046

ENSAPLT00000028579

45570984 - 45612102

41119

ENSAPLT00000025618

45570984 - 45612102

41119

ENSAPLT00000022530

45570574 - 45609236

38663