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Intron Name: Anas_platyrhynchos_platyrhynchos_4_45615358_45616728_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45615358 - 45616728

Intron Length:

1371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

TCCTAAGTAACT

Flanking Amino Acid:

PMPDREENIQAMPNGPAWCW

Intron Amino Acid Position:

666

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

76.8

33.7

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

28.2

-2.5

3.1

38.3

46.6

Minor BPS

46.6

-0.1

2.4

69.75

46.7

Associated Gene:

Gene:

LONRF1

Ensembl Gene ID:

ENSAPLG00000009735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010134

45615199 - 45629871

14673