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Intron Name: Anas_platyrhynchos_platyrhynchos_4_45714053_45735174_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

45714053 - 45735174

Intron Length:

21122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

ATTATGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TCTTTCTTCATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

38.6

Major BPS

0.72

78.4

31.2

Major PPT

81.1

0.7

0.9

77.5

Minor 5ss

37.4

-1.4

44.5

Minor BPS

67.2

0.62

1.7

82.74

39.5

Associated Gene:

Gene:

TRMT9B

Ensembl Gene ID:

ENSAPLG00000009756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026179

45713890 - 45742725

28836