Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_45791917_45803292_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

45791917 - 45803292

Intron Length:

11376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTAAGCTCC

5'SS Class:

weak_major

3'SS Sequence:

TGTCCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

CACTAATCAGAT

Flanking Amino Acid:

MILTQIEAKEACDW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.4

57.6

42.8

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

82.2

0.72

0.8

73.3

37.1

Minor 5ss

46.1

-0.4

2.7

55.9

41.8

Minor BPS

37.2

-0.8

49.27

43.1

Associated Gene:

Gene:

DLC1

Ensembl Gene ID:

ENSAPLG00000009900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010333

45766686 - 45803305

36620