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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46129122_46129389_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
46129122 - 46129389

Intron Length:
268

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCT|GTAAGTGTG

5'SS Class:
major

3'SS Sequence:
TTTTACACCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTGAT

U12 Branch Point Sequence:
TTCTTTTTACAC

Flanking Amino Acid:
MCNLQECTQPLWSADEWEYC

Intron Amino Acid Position:
920

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.7
0.58
1.1
69.5
41.3

Major BPS
91.3
1.03
0.7
79.6
35.6

Major PPT
76.1
0.59
0.9
67.4
38.7

Minor 5ss
39.2
-1.2
3.4
59.1
45.3

Minor BPS
54.8
0.13
1.7
66.32
39.9

Associated Gene:

Gene:
ADAMTS3

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46122255 - 46243549
121295

46122631 - 46246145
123515