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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46130437_46131044_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
46130437 - 46131044

Intron Length:
608

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAGGTTGT

5'SS Class:
major

3'SS Sequence:
TGATTATTAATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTGAT

U12 Branch Point Sequence:
TGATTATTAATA

Flanking Amino Acid:
GPLHDAVVVLIIPRENDTRS

Intron Amino Acid Position:
821

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.7
0.68
1
71.5
41.1

Major BPS
87.6
0.93
0.8
77.4
37.3

Major PPT
67.5
0.39
1
63.3
41.9

Minor 5ss
40.7
-1
3.2
55
44.5

Minor BPS
62.6
0.39
1.5
70
35.8

Associated Gene:

Gene:
ADAMTS3

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46122255 - 46243549
121295

46122631 - 46246145
123515