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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46131209_46132802_R


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
46131209 - 46132802

Intron Length:
1594

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGTGTT

5'SS Class:
strong_major

3'SS Sequence:
TCAATCCTTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
CTCTTTTCAATC

Flanking Amino Acid:
QEDEASPHFLAIKNQATGHY

Intron Amino Acid Position:
766

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.6
0.96
0.8
87
27.7

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
77.4
0.62
0.9
73.7
36.6

Minor 5ss
38.8
-1.3
3.4
55
43.6

Minor BPS
54.4
0.12
1.5
61.08
39.5

Associated Gene:

Gene:
ADAMTS3

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46122255 - 46243549
121295

46122631 - 46246145
123515