Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_46132884_46136494_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

46132884 - 46136494

Intron Length:

3611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGAACA

5'SS Class:

major

3'SS Sequence:

ACACATGCCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACACAT

U12 Branch Point Sequence:

TCTCCATTGACT

Flanking Amino Acid:

GTFTRTPKKLGYLKMFDIPP

Intron Amino Acid Position:

739

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

38.2

Major BPS

69.9

0.49

75.2

29.8

Major PPT

48.7

-0

1.1

44.3

35.6

Minor 5ss

32.5

-2

3.1

37.8

Minor BPS

66.5

0.6

1.6

82.3

38.8

Associated Gene:

Gene:

ADAMTS3

Ensembl Gene ID:

ENSAPLG00000010333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039550

46122255 - 46243549

121295

ENSAPLT00000010792

46122631 - 46246145

123515