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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46138524_46139137_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
46138524 - 46139137

Intron Length:
614

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTAGGTCTT

5'SS Class:
major

3'SS Sequence:
TTTTTCCTCACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTAGAA

U12 Branch Point Sequence:
ATCTCTTGAATG

Flanking Amino Acid:
RFRTRQCNNPMPINGGEDCA

Intron Amino Acid Position:
594

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1.1
74.7
41.5

Major BPS
70
0.5
1
67
39.8

Major PPT
88.9
0.88
0.6
84.3
23.7

Minor 5ss
41.2
-1
3.4
62.9
41.9

Minor BPS
60.6
0.19
1.5
62.23
40.3

Associated Gene:

Gene:
ADAMTS3

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46122255 - 46243549
121295

46122631 - 46246145
123515