Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_46145225_46146788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46145225 - 46146788

Intron Length:

1564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

CCTTTAGGAGCT

Flanking Amino Acid:

VRMIMLGYAKSISLIERGNP

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

90.3

0.91

0.7

88.4

28.7

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

38.5

-0.8

2.3

57.07

45.6

Associated Gene:

Gene:

ADAMTS3

Ensembl Gene ID:

ENSAPLG00000010333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039550

46122255 - 46243549

121295

ENSAPLT00000010792

46122631 - 46246145

123515