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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4625860_4647094_R

Intron Information:

Intron Rank:

138611

Intron Class:

major

Intron Phase:

Intron Coordinates:

4625860 - 4647094

Intron Length:

21235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGCAAT

U12 Branch Point Sequence:

GTGGCAATATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

81.9

26.3

Major BPS

48.6

-0

1.5

56.5

46.9

Major PPT

93.5

0.98

0.6

92.3

18.1

Minor 5ss

36.6

-1.5

45.9

43.7

Minor BPS

43.5

-0.4

2.1

62.94

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023046

4625682 - 4657250

31569

ENSAPLT00000024158

4625682 - 4649510

23829