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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46371650_46372959_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46371650 - 46372959

Intron Length:

1310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTAGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTTTCTTTAGCT

Flanking Amino Acid:

AAHQSRLLAKLENLQPEIKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

67.6

39.4

Major BPS

84.8

0.86

85.7

34.9

Major PPT

73.5

0.53

70.2

40.4

Minor 5ss

27.7

-2.6

2.9

32.8

42.1

Minor BPS

80.7

1.04

1.4

95.9

30.3

Associated Gene:

Gene:

COX18

Ensembl Gene ID:

ENSAPLG00000010688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011125

46367156 - 46373214

6059