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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46378358_46378690_R


Intron Information:

Intron Rank:
27

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
46378358 - 46378690

Intron Length:
333

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAATGATC

5'SS Class:
major

3'SS Sequence:
CCTCCCCCTTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTGAA

U12 Branch Point Sequence:
ACATACTGACTC

Flanking Amino Acid:
AGYMDFPKVGGMPFSVYGNA

Intron Amino Acid Position:
2024

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.3
0.53
1.1
69.7
40.9

Major BPS
82.1
0.8
0.8
71.6
36.4

Major PPT
65.7
0.35
1
67.9
26.1

Minor 5ss
36.5
-1.5
3.2
43.9
43.7

Minor BPS
44.9
-0.4
1.8
51.47
39.5

Associated Gene:

Gene:
ANKRD17

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46375400 - 46419563
44164

46375400 - 46419563
44164