Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_46378867_46380496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46378867 - 46380496

Intron Length:

1630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GTCATTCTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

TGCTGTGTCATT

Flanking Amino Acid:

WSFEGIGGNQDKVDWCHSGM

Intron Amino Acid Position:

1965

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

37.9

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

66.3

0.37

65.9

40.8

Minor 5ss

40.8

-1

3.1

58.8

45.7

Minor BPS

39.7

-0.7

2.5

59.22

45.2

Associated Gene:

Gene:

ANKRD17

Ensembl Gene ID:

ENSAPLG00000010793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018047

46375400 - 46419563

44164

ENSAPLT00000011282

46375400 - 46419563

44164