Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_46386070_46386298_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46386070 - 46386298

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTGTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

TGTTTCCTAGCT

Flanking Amino Acid:

REEGWKEVVRRSKKVSVPST

Intron Amino Acid Position:

1216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

79.5

0.66

0.8

32.6

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

58.7

0.35

1.9

81.42

39.9

Associated Gene:

Gene:

ANKRD17

Ensembl Gene ID:

ENSAPLG00000010793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018047

46375400 - 46419563

44164

ENSAPLT00000011282

46375400 - 46419563

44164