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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46410992_46411514_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
46410992 - 46411514

Intron Length:
523

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACTATT

5'SS Class:
strong_major

3'SS Sequence:
TATTTTCTTGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTGAT

U12 Branch Point Sequence:
ATTTTCTTGAAG

Flanking Amino Acid:
KRWWHYYLVKELTSMLKQRR

Intron Amino Acid Position:
12

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.4
0.86
1
90.9
28.7

Major BPS
91.3
1.03
0.7
79.6
35.6

Major PPT
78.5
0.64
1
79.9
32.1

Minor 5ss
47.2
-0.3
2.7
68.8
41.8

Minor BPS
65.6
0.35
1.5
69.53
37.6

Associated Gene:

Gene:
ANKRD17

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46375400 - 46419563
44164

46375400 - 46419563
44164