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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4647135_4649273_R

Intron Information:

Intron Rank:

138614

Intron Class:

major

Intron Phase:

Intron Coordinates:

4647135 - 4649273

Intron Length:

2139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGGGTGCT

5'SS Class:

major

3'SS Sequence:

TTTGTTTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTTGTTTCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

67.9

37.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

81.2

0.7

0.9

77.7

35.5

Minor 5ss

30.9

-2.2

3.5

45.1

43.2

Minor BPS

62.3

0.38

1.6

74.67

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024158

4625682 - 4649510

23829