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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46492936_46493681_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
46492936 - 46493681

Intron Length:
746

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAAGCTA

5'SS Class:
strong_major

3'SS Sequence:
CCTATTACTATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATGTAAT

U12 Branch Point Sequence:
ATTAGCTTAATG

Flanking Amino Acid:
SDVGACLDGKETGIREKVKK

Intron Amino Acid Position:
160

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.5
0.72
1
72
39.3

Major BPS
75.6
0.64
1.1
75.7
36.5

Major PPT
72
0.5
0.9
65.8
34.6

Minor 5ss
33.7
-1.9
3.5
47
48.3

Minor BPS
60
0.18
1.9
66.48
41.5

Associated Gene:

Gene:
ALB

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46465279 - 46498836
33558

46489195 - 46499224
10030