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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46496532_46496915_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
46496532 - 46496915

Intron Length:
384

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTAGGTGCA

5'SS Class:
major

3'SS Sequence:
TACTTGTTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAC

U12 Branch Point Sequence:
AAATTTTTACTT

Flanking Amino Acid:
DNPAECYANAQDQLNEHIKE

Intron Amino Acid Position:
352

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.4
0.34
1.2
59.3
39.9

Major BPS
86.6
0.91
0.8
77.7
36.7

Major PPT
82.2
0.72
0.9
76.5
37.2

Minor 5ss
34.5
-1.8
3.5
50.4
46

Minor BPS
54.8
0.23
1.5
67.51
37.8

Associated Gene:

Gene:
ALB

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46465279 - 46498836
33558

46489195 - 46499224
10030