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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46497014_46497169_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
46497014 - 46497169

Intron Length:
156

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGC|GTAAGTACT

5'SS Class:
major

3'SS Sequence:
GCATTTTTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TCATTTTTAATG

Flanking Amino Acid:
TTHGEADFLKALLIRYTKKM

Intron Amino Acid Position:
384

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.6
0.51
1.3
75.3
40.8

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
82.8
0.74
0.9
80.4
36.9

Minor 5ss
39.3
-1.2
2.7
48.5
40.3

Minor BPS
65.9
0.36
1.3
62.98
39.9

Associated Gene:

Gene:
ALB

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

46465279 - 46498836
33558

46489195 - 46499224
10030