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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46519797_46520391_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46519797 - 46520391

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAAATTC

5'SS Class:

major

3'SS Sequence:

GTTTACCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

CTTTGTTTACCT

Flanking Amino Acid:

GDMLECMHDREEILHYVCTN

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

69.3

36.6

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

81.9

0.72

0.9

36.1

Minor 5ss

41.4

-1

3.2

50.9

45.8

Minor BPS

57.1

0.3

2.1

78.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011956

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012461

46513839 - 46533197

19359