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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46521548_46522510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46521548 - 46522510

Intron Length:

963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

TTCTTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

GACTCCTTAAAC

Flanking Amino Acid:

DSPQDCCSRGEEELKKHIYE

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

62.7

37.5

Major BPS

77.9

0.69

0.8

75.9

Major PPT

88.4

0.86

0.6

88.2

21.6

Minor 5ss

26.7

-2.7

3.2

26.6

36.8

Minor BPS

69.6

0.6

1.4

70.02

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011956

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012461

46513839 - 46533197

19359