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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46625727_46625810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46625727 - 46625810

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTCACCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CCCTCCTCAGTC

Flanking Amino Acid:

AGPHCAVPEVIATTKAGKTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

33.2

Major BPS

72.7

0.56

30.1

Major PPT

0.61

0.8

30.5

Minor 5ss

36.4

-1.5

3.2

49.6

39.8

Minor BPS

-0.1

1.8

53.86

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029784

46625420 - 46627163

1744