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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46808829_46830003_F

Intron Information:

Intron Rank:

124744

Intron Class:

major

Intron Phase:

Intron Coordinates:

46808829 - 46830003

Intron Length:

21175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGAGAC

U12 Branch Point Sequence:

ATTGTAGAGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

75.9

35.2

Major BPS

48.5

-0

1.2

44.4

38.7

Major PPT

85.1

0.79

0.8

80.1

31.8

Minor 5ss

33.7

-1.9

2.9

Minor BPS

37.7

-0.9

2.3

52.53

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030984

46808189 - 46830155

21967