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Intron Name: Anas_platyrhynchos_platyrhynchos_4_46844635_46845495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46844635 - 46845495

Intron Length:

861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTATTCATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TCTTTATTCATT

Flanking Amino Acid:

KNKLKDLGVPVEDEDDIESG

Intron Amino Acid Position:

878

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

74.5

37.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

80.5

0.69

0.8

Minor 5ss

39.2

-1.2

2.9

49.4

46.6

Minor BPS

53.2

0.18

76.06

41.3

Associated Gene:

Gene:

USO1

Ensembl Gene ID:

ENSAPLG00000013128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036579

46844557 - 46872683

28127

ENSAPLT00000020365

46844557 - 46872683

28127

ENSAPLT00000013748

46843698 - 46876119

32422

ENSAPLT00000045972

46844557 - 46872683

28127